Basic Information
Locus ID:
BH07.872
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Targeting protein for Xklp2 (TPX2)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH07 | 8206021 | 8209011 | + | BH07.872 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.01 | 40,375.28 Da | 54.20 | 50.96 | -1.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF06886 | Targeting protein for Xklp2 (TPX2) domain | 183 | 267 | 1.0E-24 | IPR027329 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 32 | 47 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 280 | 313 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 239 | 376 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 329 | 369 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 14 | 182 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 130 | 172 | - | - |
| Coils | Coil | Coil | 198 | 218 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G32330.2 | TPX2 (targeting protein for Xklp2) protein family. | 1.81E-53 |
| RefSeq | XP_039788655.1 | protein WVD2-like 5 isoform X1 [Panicum virgatum] | 5.36E-200 |
| Q94C48 | Protein WVD2-like 5 OS=Arabidopsis thaliana OX=3702 GN=WDL5 PE=1 SV=1 | 1.8E-52 | |
| TrEMBL | A0A8T0WQH0 | TPX2 domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_1NG095300 PE=3 SV=1 | 1.21E-198 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology