Basic Information
Locus ID:
BH07.831
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Leucine rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH07 | 7911092 | 7917283 | + | BH07.831 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.39 | 82,034.84 Da | 53.62 | 88.60 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 97 | 112 | 0.2 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 424 | 638 | 6.5E-30 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 119 | 178 | 4.0E-9 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 64 | 245 | 8.75E-37 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 398 | 697 | 1.83E-59 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 26 | 264 | 5.4E-46 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 500 | 713 | 1.3E-46 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 383 | 499 | 4.4E-22 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 422 | 702 | 28.640444 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 428 | 450 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 265 | 283 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 261 | 300 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53730.1 | STRUBBELIG-receptor family 6. | 9.08E-110 |
| RefSeq | XP_025794912.1 | protein STRUBBELIG-RECEPTOR FAMILY 8-like [Panicum hallii] | 0 |
| Q9C8M9 | Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana OX=3702 GN=SRF6 PE=1 SV=1 | 8.81E-109 | |
| TrEMBL | A0A2S3GMJ0 | Protein kinase domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_1G071800 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology