Basic Information
Locus ID:
BH07.824
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
F-box domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH07 | 7825177 | 7827097 | - | BH07.824 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.29 | 51,930.49 Da | 43.65 | 99.41 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 16 | 51 | 3.0E-7 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 13 | 58 | 3.53E-11 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 106 | 320 | 4.71E-12 | - |
| Gene3D | G3DSA:1.20.1280.50 | - | 2 | 59 | 4.4E-8 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 111 | 378 | 2.8E-10 | IPR032675 |
| SMART | SM00256 | fbox_2 | 20 | 59 | 0.0029 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 14 | 50 | 11.775988 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G26350.1 | F-box/RNI-like/FBD-like domains-containing protein. | 1.93E-12 |
| RefSeq | XP_039788567.1 | FBD-associated F-box protein At5g56370-like [Panicum virgatum] | 2.31E-180 |
| Q9STQ0 | Putative F-box/FBD/LRR-repeat protein At4g26350 OS=Arabidopsis thaliana OX=3702 GN=At4g26350 PE=4 SV=1 | 1.92E-11 | |
| TrEMBL | A0A8T0WPF6 | F-box domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_1NG054400 PE=4 SV=1 | 5.22E-179 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology