Basic Information
Locus ID:
BH07.812
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH07 | 7731752 | 7741932 | + | BH07.812 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.22 | 164,116.20 Da | 65.03 | 70.14 | -0.68 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02902 | Ulp1 protease family, C-terminal catalytic domain | 992 | 1092 | 1.5E-5 | IPR003653 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 917 | 1130 | 3.14E-20 | IPR038765 |
| Gene3D | G3DSA:3.40.395.10 | Adenoviral Proteinase; Chain A | 911 | 1106 | 8.6E-14 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1301 | 1315 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 309 | 327 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 96 | 117 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 710 | 730 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 271 | 300 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 269 | 337 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1291 | 1404 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1159 | 1180 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 694 | 764 | - | - |
| Coils | Coil | Coil | 524 | 552 | - | - |
| Coils | Coil | Coil | 1405 | 1453 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51500.1 | 3.51E-9 | |
| RefSeq | XP_039815011.1 | uncharacterized protein LOC120677882 [Panicum virgatum] | 4.11E-182 |
| TrEMBL | A0A8T0QV26 | ULP_PROTEASE domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_6NG075360 PE=3 SV=1 | 1.44E-181 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 9 | AH01.1897, AH04.860, AH07.1629, BH04.533, BH04.967, BH07.812 ... |
| Poaceae | Oryza coarctata | 6 | Oco03G009010, Oco05G016430, Oco09G004560, Oco10G016000 ... |
| Poaceae | Oryza sativa | 1 | LOC_Os06g28030.1 |
| Poaceae | Sporobolus alterniflorus | 13 | Chr02G009070, Chr06G027180, Chr06G027640, Chr08G004160 ... |
| Poaceae | Zea mays | 1 | Zm00001eb262950_P001 |