Basic Information
Locus ID:
BH07.775
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Domain Homologous to E6-AP Carboxyl Terminus with
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH07 | 7359089 | 7362860 | - | BH07.775 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.29 | 88,729.16 Da | 56.81 | 74.59 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00632 | HECT-domain (ubiquitin-transferase) | 679 | 802 | 2.4E-36 | IPR000569 |
| Pfam | PF00632 | HECT-domain (ubiquitin-transferase) | 325 | 677 | 3.1E-6 | IPR000569 |
| SUPERFAMILY | SSF56204 | Hect, E3 ligase catalytic domain | 639 | 795 | 2.35E-43 | IPR035983 |
| Gene3D | G3DSA:3.90.1750.10 | Hect, E3 ligase catalytic domains | 165 | 295 | 4.7E-6 | - |
| Gene3D | G3DSA:3.30.2410.10 | Hect, E3 ligase catalytic domain | 678 | 800 | 4.2E-31 | - |
| SMART | SM00119 | hect_3 | 551 | 802 | 1.5E-8 | IPR000569 |
| ProSiteProfiles | PS50237 | HECT domain profile. | 679 | 802 | 28.449535 | IPR000569 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 392 | 439 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 34 | 56 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 536 | 551 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 475 | 567 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G38600.1 | HEAT repeat ;HECT-domain (ubiquitin-transferase). encodes a member of HECT ubiquitin protein ligase family that is involved in trichome cell morphogenesis. Mutants in this gene exhibit supernumerary trichome branches and increased DNA content. | 1.44E-169 |
| RefSeq | XP_025807197.1 | LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase UPL3 [Panicum hallii] | 2.67E-276 |
| Q6WWW4 | E3 ubiquitin-protein ligase UPL3 OS=Arabidopsis thaliana OX=3702 GN=UPL3 PE=1 SV=1 | 1.42E-168 | |
| TrEMBL | A0A2S3GKN6 | HECT-type E3 ubiquitin transferase OS=Panicum hallii OX=206008 GN=PAHAL_1G001400 PE=3 SV=1 | 1.21E-276 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||