Basic Information
Locus ID:
BH07.71
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
F-box domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH07 | 556823 | 558727 | + | BH07.71 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.27 | 61,300.88 Da | 62.84 | 71.72 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 65 | 100 | 2.2E-6 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 58 | 116 | 8.5E-14 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 62 | 99 | 9.4E-10 | - |
| SMART | SM00256 | fbox_2 | 63 | 103 | 3.6E-7 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 176 | 368 | 2.4E-14 | IPR017451 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 479 | 508 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G52610.1 | F-box and associated interaction domains-containing protein. | 1.81E-12 |
| RefSeq | XP_034592004.1 | putative F-box protein At4g38870 [Setaria viridis] | 2.86E-149 |
| Q9LTF6 | Putative F-box protein At5g52610 OS=Arabidopsis thaliana OX=3702 GN=At5g52610 PE=4 SV=1 | 1.79E-11 | |
| TrEMBL | A0A4U6WA65 | F-box domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_1G118300v2 PE=4 SV=1 | 2.27E-148 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology