Basic Information
Locus ID:
BH07.668
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH07 | 6383251 | 6394535 | - | BH07.668 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.98 | 116,756.20 Da | 52.30 | 80.58 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 37 | 74 | 2.4E-5 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 123 | 182 | 3.0E-8 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 565 | 800 | 3.1E-33 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 500 | 800 | 1.85E-55 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 38 | 241 | 2.95E-36 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 494 | 602 | 1.2E-18 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 40 | 261 | 1.0E-42 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 604 | 814 | 1.9E-49 | - |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 123 | 146 | 7.026593 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 526 | 810 | 28.880722 | IPR000719 |
| PRINTS | PR01217 | Proline rich extensin signature | 462 | 487 | 3.1E-10 | - |
| PRINTS | PR01217 | Proline rich extensin signature | 266 | 278 | 3.1E-10 | - |
| PRINTS | PR01217 | Proline rich extensin signature | 443 | 460 | 3.1E-10 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 489 | 513 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1037 | 1052 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 379 | 409 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 251 | 311 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 283 | 311 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 345 | 428 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 944 | 977 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1037 | 1058 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 251 | 265 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 345 | 369 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 266 | 282 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G20850.1 | STRUBBELIG-receptor family 1. | 2.71E-144 |
| RefSeq | XP_012704495.1 | protein STRUBBELIG-RECEPTOR FAMILY 3 isoform X1 [Setaria italica] | 0 |
| Q06BH3 | Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsis thaliana OX=3702 GN=SRF1 PE=1 SV=2 | 2.62E-143 | |
| TrEMBL | A0A8T0WH21 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_1NG070900 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology