Basic Information
Locus ID:
BH07.542
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH07 | 5416327 | 5420272 | - | BH07.542 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.85 | 104,480.02 Da | 54.52 | 84.96 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 692 | 944 | 2.8E-30 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 672 | 946 | 1.78E-51 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 19 | 68 | 4.54E-7 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 760 | 962 | 3.2E-41 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 690 | 759 | 5.9E-15 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 10 | 91 | 5.3E-9 | IPR032675 |
| SMART | SM00220 | serkin_6 | 672 | 950 | 2.0E-13 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 672 | 950 | 30.873615 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 528 | 542 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 179 | 212 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 522 | 542 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G75820.1 | Leucine-rich receptor-like protein kinase family protein. Putative receptor kinase with an extracellular leucine-rich domain. Controls shoot and floral meristem size, and contributes to establish and maintain floral meristem identity. Negatively regulated by KAPP (kinase-associated protein phosphatase). CLV3 peptide binds directly CLV1 ectodomain. | 2.18E-89 |
| RefSeq | XP_039787749.1 | leucine-rich repeat receptor-like kinase protein THICK TASSEL DWARF1 [Panicum virgatum] | 6.33E-165 |
| P0DL10 | Leucine-rich repeat receptor-like kinase protein THICK TASSEL DWARF1 OS=Zea mays OX=4577 GN=TD1 PE=2 SV=1 | 2.85E-94 | |
| TrEMBL | A0A8T0WIB8 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_1NG019500 PE=4 SV=1 | 1.43E-163 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
No orthogroup found for BH07.542.