Basic Information
Locus ID:
BH07.529
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
F-box FBD LRR-repeat protein At4g03220
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH07 | 5201540 | 5204426 | - | BH07.529 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.22 | 55,835.45 Da | 58.50 | 95.66 | 0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08387 | FBD | 425 | 462 | 1.0E-4 | IPR006566 |
| SUPERFAMILY | SSF52047 | RNI-like | 178 | 287 | 1.29E-5 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 27 | 71 | 7.72E-10 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 132 | 484 | 6.1E-6 | IPR032675 |
| SMART | SM00579 | 9598neu4hmm | 423 | 491 | 0.0099 | IPR006566 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 28 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G67390.1 | F-box family protein. | 6.8E-8 |
| RefSeq | XP_025817142.1 | putative F-box/FBD/LRR-repeat protein At5g22670 [Panicum hallii] | 7.37E-224 |
| Q9FYF4 | Putative F-box protein At1g67390 OS=Arabidopsis thaliana OX=3702 GN=At1g67390 PE=4 SV=1 | 6.75E-7 | |
| TrEMBL | A0A2T7F432 | F-box domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_1G096000 PE=4 SV=1 | 1.02E-223 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology