Basic Information
Locus ID:
BH07.473
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
source UniProtKB
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH07 | 4652285 | 4663998 | + | BH07.473 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.91 | 267,433.66 Da | 53.41 | 70.44 | -0.63 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02992 | Transposase family tnp2 | 349 | 550 | 2.5E-82 | IPR004242 |
| Pfam | PF13952 | Domain of unknown function (DUF4216) | 995 | 1060 | 9.9E-13 | IPR025312 |
| Pfam | PF13960 | Domain of unknown function (DUF4218) | 734 | 840 | 6.9E-38 | IPR025452 |
| Pfam | PF13963 | Transposase-associated domain | 66 | 139 | 4.8E-18 | IPR029480 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1310 | 1326 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2122 | 2151 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1062 | 1083 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1302 | 1326 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2043 | 2090 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 176 | 196 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1514 | 1528 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1376 | 1422 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1981 | 2090 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2003 | 2024 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1512 | 1536 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1219 | 1248 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1830 | 1853 | - | - |
| Coils | Coil | Coil | 1781 | 1815 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_039778865.1 | uncharacterized protein LOC120646298 [Panicum virgatum] | 0 |
| TrEMBL | Q53KV8 | Transposon protein, putative, CACTA, En/Spm sub-class, expressed OS=Oryza sativa subsp. japonica OX=39947 GN=LOC_Os11g06570 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 46 | AH01.2619, AH01.3243, AH02.2591, AH02.744, AH03.1151 ... |
| Poaceae | Lolium multiflorum | 13 | gene-QYE76_005385, gene-QYE76_005912, gene-QYE76_006405 ... |