Basic Information
Locus ID:
BH07.439
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Short Name:
CAX6
Description:
Belongs to the Ca(2 ) cation antiporter (CaCA) (TC 2.A.19) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH07 | 4364720 | 4367610 | + | BH07.439 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.96 | 51,475.85 Da | 37.20 | 107.92 | 0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01699 | Sodium/calcium exchanger protein | 129 | 283 | 1.2E-18 | IPR004837 |
| Pfam | PF01699 | Sodium/calcium exchanger protein | 319 | 459 | 7.0E-21 | IPR004837 |
| Gene3D | G3DSA:1.20.1420.30 | - | 307 | 462 | 5.5E-18 | IPR044880 |
| Gene3D | G3DSA:1.20.1420.30 | - | 157 | 297 | 1.3E-14 | IPR044880 |
| TIGRFAM | TIGR00846 | caca2: calcium/proton exchanger | 95 | 460 | 9.1E-111 | - |
| TIGRFAM | TIGR00378 | cax: calcium/proton exchanger | 116 | 461 | 1.5E-94 | IPR004798 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G55730.1 | cation exchanger 5. member of Low affinity calcium antiporter CAX2 family | 2.61E-173 |
| RefSeq | XP_034606152.1 | putative vacuolar cation/proton exchanger 4 isoform X1 [Setaria viridis] | 1.15E-285 |
| Q6YXZ1 | Putative vacuolar cation/proton exchanger 4 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0138900 PE=3 SV=1 | 4.75E-191 | |
| TrEMBL | A0A4U6W654 | Vacuolar cation/proton exchanger OS=Setaria viridis OX=4556 GN=SEVIR_1G090800v2 PE=3 SV=1 | 2.59E-284 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology