Basic Information
Locus ID:
BH07.4093
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Short Name:
CPK13
Description:
EF-hand domain pair
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH07 | 45895858 | 45902852 | + | BH07.4093 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.95 | 62,740.89 Da | 43.98 | 83.28 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 64 | 319 | 7.81418E-134 | - |
| CDD | cd00051 | EFh | 335 | 396 | 6.66268E-7 | IPR002048 |
| CDD | cd00051 | EFh | 371 | 433 | 7.03495E-21 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 65 | 319 | 2.4E-71 | IPR000719 |
| Pfam | PF13833 | EF-hand domain pair | 320 | 362 | 8.7E-6 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 370 | 433 | 5.6E-14 | IPR002048 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 63 | 319 | 6.2E-82 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 319 | 457 | 5.57E-34 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 320 | 436 | 5.4E-34 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 66 | 150 | 3.2E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 151 | 319 | 2.7E-57 | - |
| SMART | SM00220 | serkin_6 | 65 | 320 | 2.5E-90 | IPR000719 |
| SMART | SM00054 | efh_1 | 407 | 435 | 5.9E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 335 | 363 | 1.3 | IPR002048 |
| SMART | SM00054 | efh_1 | 371 | 399 | 9.8E-5 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 403 | 438 | 14.597092 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 65 | 324 | 45.318565 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 367 | 402 | 14.736568 | IPR002048 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 71 | 94 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 416 | 428 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 380 | 392 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 185 | 197 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 44 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51850.1 | calcium-dependent protein kinase 13. member of Calcium Dependent Protein Kinase | 3.28E-245 |
| RefSeq | XP_004970457.1 | calcium-dependent protein kinase 3 [Setaria italica] | 2.2800000000002E-311 |
| Q8LPZ7 | Calcium-dependent protein kinase 3 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK3 PE=2 SV=1 | 1.11E-297 | |
| TrEMBL | A0A1E5UKJ6 | Calcium-dependent protein kinase 13 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0025578 PE=4 SV=1 | 8.9499999999999E-311 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology