Basic Information
Locus ID:
BH07.4018
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Kelch motif
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH07 | 45367416 | 45368558 | + | BH07.4018 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.40 | 40,097.86 Da | 60.86 | 76.66 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01344 | Kelch motif | 168 | 213 | 1.3E-10 | IPR006652 |
| Pfam | PF01344 | Kelch motif | 130 | 165 | 8.8E-5 | IPR006652 |
| SUPERFAMILY | SSF117281 | Kelch motif | 86 | 344 | 2.22E-38 | IPR015915 |
| Gene3D | G3DSA:2.120.10.80 | - | 79 | 366 | 2.0E-37 | IPR015915 |
| SMART | SM00612 | kelc_smart | 180 | 228 | 6.9E-5 | IPR006652 |
| SMART | SM00612 | kelc_smart | 130 | 178 | 6.2E-6 | IPR006652 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G80440.1 | Galactose oxidase/kelch repeat superfamily protein. | 2.81E-66 |
| RefSeq | XP_012700569.1 | LOW QUALITY PROTEIN: F-box/kelch-repeat protein At1g80440-like [Setaria italica] | 1.57E-231 |
| Q9M8L2 | F-box/kelch-repeat protein At1g80440 OS=Arabidopsis thaliana OX=3702 GN=At1g80440 PE=2 SV=1 | 2.72E-65 | |
| TrEMBL | A0A4U6V0M0 | F-box domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_4G238100v2 PE=4 SV=1 | 2.92E-229 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology