Basic Information
Locus ID:
BH07.4004
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Short Name:
SOS2
Description:
Non-specific serine threonine protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH07 | 45161185 | 45166942 | - | BH07.4004 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.96 | 49,569.59 Da | 32.51 | 93.48 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd12195 | CIPK_C | 311 | 424 | 7.86229E-50 | - |
| Pfam | PF03822 | NAF domain | 307 | 366 | 2.2E-20 | IPR004041 |
| Pfam | PF00069 | Protein kinase domain | 11 | 264 | 3.2E-73 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 7 | 265 | 2.7E-91 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 90 | 2.2E-30 | - |
| Gene3D | G3DSA:3.30.310.80 | Kinase associated domain 1, KA1 | 304 | 430 | 3.6E-53 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 91 | 272 | 1.6E-61 | - |
| SMART | SM00220 | serkin_6 | 11 | 264 | 9.9E-106 | IPR000719 |
| ProSiteProfiles | PS50816 | NAF domain profile. | 305 | 329 | 12.242463 | IPR018451 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 11 | 264 | 51.848473 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 130 | 142 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 17 | 40 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
ko04068 (FoxO signaling pathway)
map04068 (FoxO signaling pathway)
ko04140 (Autophagy - animal)
map04140 (Autophagy - animal)
ko04150 (mTOR signaling pathway)
map04150 (mTOR signaling pathway)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04152 (AMPK signaling pathway)
map04152 (AMPK signaling pathway)
ko04211 (Longevity regulating pathway)
map04211 (Longevity regulating pathway)
ko04213 (Longevity regulating pathway - multiple species)
map04213 (Longevity regulating pathway - multiple species)
ko04371 (Apelin signaling pathway)
map04371 (Apelin signaling pathway)
ko04710 (Circadian rhythm)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G35410.1 | Protein kinase superfamily protein. encodes a member of the CBL-interacting protein kinase family, is a regulatory component controlling plant potassium nutrition | 7.14E-226 |
| RefSeq | XP_002438654.1 | CBL-interacting protein kinase 24 [Sorghum bicolor] | 4.15E-301 |
| Q69Q47 | CBL-interacting protein kinase 24 OS=Oryza sativa subsp. japonica OX=39947 GN=CIPK24 PE=1 SV=1 | 7.51E-291 | |
| TrEMBL | A0A3L6PEY6 | non-specific serine/threonine protein kinase OS=Panicum miliaceum OX=4540 GN=C2845_PM10G15740 PE=3 SV=1 | 6.62E-300 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology