Basic Information
Locus ID:
BH07.3810
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Zinc finger, C3HC4 type (RING finger)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH07 | 43449485 | 43454419 | + | BH07.3810 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.11 | 80,422.16 Da | 70.67 | 64.09 | -0.96 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | 121 | 136 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 447 | 492 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 146 | 180 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 319 | 359 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 35 | 72 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 324 | 359 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 214 | 251 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 117 | 189 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 224 | 251 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 447 | 494 | - | - |
| Coils | Coil | Coil | 78 | 98 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G04460.2 | RING/U-box superfamily protein. | 2.11E-94 |
| RefSeq | XP_025804336.1 | uncharacterized protein LOC112883265 isoform X2 [Panicum hallii] | 0 |
| TrEMBL | A0A2S3GUQ7 | RING-type domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_1G453800 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology