Basic Information
Locus ID:
BH07.3548
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH07 | 41093139 | 41094230 | - | BH07.3548 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.33 | 39,227.41 Da | 67.43 | 81.52 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06623 | PKc_MAPKK_plant_like | 89 | 346 | 3.72282E-133 | - |
| Pfam | PF00069 | Protein kinase domain | 91 | 347 | 1.9E-61 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 91 | 349 | 2.97E-75 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 85 | 169 | 1.2E-24 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 170 | 355 | 7.5E-48 | - |
| SMART | SM00220 | serkin_6 | 90 | 347 | 1.5E-82 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 90 | 347 | 46.039398 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 203 | 215 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 96 | 119 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 55 | 74 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 83 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G51660.1 | mitogen-activated protein kinase kinase 4. Encodes a mitogen-activated map kinase kinase (there are nine in Arabidopsis) involved in innate immunity. This protein activates MPK3/MPK6 and early-defense genes redundantly with MKK5. In plants with both MKK5 and MKK6 levels reduced by RNAi plants, floral organs do not abscise suggestion a role for both proteins in mediating floral organ abscission. | 1.45E-138 |
| RefSeq | XP_039776959.1 | mitogen-activated protein kinase kinase 5-like [Panicum virgatum] | 3.31E-244 |
| O80397 | Mitogen-activated protein kinase kinase 4 OS=Arabidopsis thaliana OX=3702 GN=MKK4 PE=1 SV=1 | 1.4E-137 | |
| TrEMBL | A0A3L6RVI9 | Mitogen-activated protein kinase kinase 5-like OS=Panicum miliaceum OX=4540 GN=C2845_PM11G23560 PE=3 SV=1 | 3.97E-238 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology