Basic Information
Locus ID:
BH07.3145
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs.
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH07 | 37720553 | 37725314 | + | BH07.3145 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.20 | 48,674.42 Da | 70.96 | 84.80 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Coils | Coil | Coil | 294 | 314 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G55020.2 | - | 1.42E-10 |
| RefSeq | XP_039830752.1 | TBC1 domain family member 2B-like isoform X5 [Panicum virgatum] | 6.31E-18 |
| TrEMBL | A0A8T0MXB7 | Rab-GAP TBC domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_9NG690600 PE=4 SV=1 | 1.44E-16 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 11 | AH02.1701, AH03.1663, AH03.1891, AH05.2284, AH08.1290 ... |
| Poaceae | Zea mays | 2 | Zm00001eb109200_P001, Zm00001eb273310_P001 |