Basic Information
Locus ID:
BH07.313
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
F-box domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH07 | 3266511 | 3267726 | + | BH07.313 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.24 | 43,006.82 Da | 32.81 | 81.82 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 22 | 64 | 3.0E-8 | IPR001810 |
| SUPERFAMILY | SSF50965 | Galactose oxidase, central domain | 108 | 342 | 1.31E-5 | IPR011043 |
| SUPERFAMILY | SSF81383 | F-box domain | 15 | 74 | 5.63E-14 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 20 | 78 | 1.9E-9 | - |
| SMART | SM00256 | fbox_2 | 26 | 65 | 1.6E-6 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 107 | 309 | 3.9E-22 | IPR017451 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 20 | 66 | 8.729132 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G62510.1 | F-box family protein. | 2.08E-10 |
| RefSeq | XP_025805018.1 | putative F-box protein At2g02030 [Panicum hallii] | 2.39E-146 |
| Q9FJJ4 | F-box protein At5g62510 OS=Arabidopsis thaliana OX=3702 GN=At5g62510 PE=2 SV=1 | 2.07E-9 | |
| TrEMBL | A0A835B2F2 | F-box domain-containing protein OS=Digitaria exilis OX=1010633 GN=HU200_043786 PE=4 SV=1 | 2.73E-170 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology