Basic Information
Locus ID:
BH07.2263
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH07 | 30105022 | 30107966 | + | BH07.2263 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.75 | 91,644.98 Da | 28.06 | 93.99 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 203 | 224 | 0.74 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 312 | 368 | 5.5E-9 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 517 | 782 | 9.4E-50 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 36 | 375 | 4.49E-41 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 495 | 785 | 6.66E-74 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 592 | 803 | 3.3E-56 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 474 | 591 | 1.3E-27 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 21 | 264 | 5.0E-47 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 268 | 391 | 5.6E-29 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 355 | 377 | 28.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 128 | 152 | 83.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 202 | 224 | 270.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 55 | 78 | 0.14 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 331 | 354 | 71.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 516 | 789 | 4.5E-38 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 516 | 793 | 39.467087 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 522 | 543 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 637 | 649 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 334 | 347 | 7.7E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 355 | 368 | 7.7E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 797 | 817 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G24650.1 | Leucine-rich repeat protein kinase family protein. | 1.79E-128 |
| RefSeq | XP_047090897.1 | receptor-like kinase TMK4 [Lolium rigidum] | 2.31E-203 |
| Q2R560 | Receptor protein kinase WSS1 OS=Oryza sativa subsp. japonica OX=39947 GN=WSS1 PE=1 SV=1 | 1.85E-184 | |
| TrEMBL | A0A835DVQ8 | Protein kinase domain-containing protein OS=Digitaria exilis OX=1010633 GN=HU200_062378 PE=4 SV=1 | 4.74E-238 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology