Basic Information
Locus ID:
BH07.2258
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
No apical meristem (NAM) protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH07 | 30018134 | 30027662 | - | BH07.2258 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.13 | 79,175.96 Da | 57.00 | 73.24 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02365 | No apical meristem (NAM) protein | 58 | 201 | 1.1E-17 | IPR003441 |
| SUPERFAMILY | SSF101941 | NAC domain | 41 | 220 | 4.97E-32 | IPR036093 |
| Gene3D | G3DSA:2.170.150.80 | NAC domain | 66 | 224 | 1.4E-24 | IPR036093 |
| ProSiteProfiles | PS51005 | NAC domain profile. | 57 | 220 | 25.249901 | IPR003441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 246 | 269 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G01600.1 | NAC domain containing protein 44. | 3.97E-78 |
| RefSeq | XP_034580078.1 | SUPPRESSOR OF GAMMA RESPONSE 1-like [Setaria viridis] | 1.75E-235 |
| Q6NQK2 | SUPPRESSOR OF GAMMA RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=SOG1 PE=1 SV=1 | 6.55E-72 | |
| TrEMBL | A0A3L6QEE7 | NAC domain-containing protein 73-like OS=Panicum miliaceum OX=4540 GN=C2845_PM12G19170 PE=4 SV=1 | 2.5E-234 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology