Basic Information
Locus ID:
BH07.2250
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH07 | 29863371 | 29866762 | + | BH07.2250 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.61 | 39,420.92 Da | 46.99 | 87.78 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 32 | 286 | 5.8088E-106 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 30 | 286 | 5.2E-57 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 19 | 311 | 3.1E-73 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 107 | 310 | 1.2E-51 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 14 | 105 | 1.0E-21 | - |
| SMART | SM00220 | serkin_6 | 26 | 290 | 6.6E-64 | IPR000719 |
| PIRSF | PIRSF000615 | TyrPK_CSF1-R | 119 | 313 | 1.0E-20 | - |
| PIRSF | PIRSF000615 | TyrPK_CSF1-R | 12 | 128 | 0.012 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 26 | 290 | 42.618969 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 146 | 158 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 32 | 53 | - | IPR017441 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 102 | 115 | 7.7E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 140 | 158 | 7.7E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 257 | 279 | 7.7E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 214 | 236 | 7.7E-12 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 307 | 336 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 307 | 326 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G50180.1 | Protein kinase superfamily protein. | 7.75E-197 |
| RefSeq | XP_025813071.1 | serine/threonine-protein kinase STY13-like [Panicum hallii] | 2.66E-248 |
| Q9ZQ31 | Serine/threonine-protein kinase STY13 OS=Arabidopsis thaliana OX=3702 GN=STY13 PE=1 SV=2 | 1.2E-73 | |
| TrEMBL | A0A2S3GQG9 | Protein kinase domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_1G289800 PE=3 SV=1 | 6.01E-247 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology