Basic Information
Locus ID:
BH07.2120
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH07 | 28445106 | 28448114 | - | BH07.2120 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.26 | 59,207.00 Da | 56.32 | 75.52 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 5 | 41 | 6.5E-6 | IPR001810 |
| Pfam | PF08268 | F-box associated domain | 194 | 279 | 1.4E-4 | IPR013187 |
| SUPERFAMILY | SSF81383 | F-box domain | 4 | 41 | 6.02E-7 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 5 | 43 | 5.4E-7 | - |
| SMART | SM00256 | fbox_2 | 8 | 48 | 9.7E-4 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 93 | 300 | 1.4E-23 | IPR017451 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_004974816.1 | F-box protein At3g07870 [Setaria italica] | 6.54E-64 |
| TrEMBL | A0A835DUF7 | F-box domain-containing protein OS=Digitaria exilis OX=1010633 GN=HU200_065718 PE=4 SV=1 | 1.09E-115 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology