Basic Information
Locus ID:
BH07.1954
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
source UniProtKB
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH07 | 26524341 | 26532800 | + | BH07.1954 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.30 | 163,442.63 Da | 52.26 | 73.86 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13960 | Domain of unknown function (DUF4218) | 882 | 988 | 3.8E-38 | IPR025452 |
| Pfam | PF13963 | Transposase-associated domain | 168 | 241 | 2.7E-18 | IPR029480 |
| Pfam | PF13952 | Domain of unknown function (DUF4216) | 1142 | 1207 | 4.5E-14 | IPR025312 |
| Pfam | PF02992 | Transposase family tnp2 | 485 | 698 | 1.9E-91 | IPR004242 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1382 | 1398 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1319 | 1429 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 278 | 298 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1334 | 1348 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_039778865.1 | uncharacterized protein LOC120646298 [Panicum virgatum] | 0 |
| TrEMBL | Q75HF8 | Transposon protein, putative, CACTA, En/Spm sub-class OS=Oryza sativa subsp. japonica OX=39947 GN=LOC_Os03g60010 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 46 | AH01.2619, AH01.3243, AH02.2591, AH02.744, AH03.1151 ... |
| Poaceae | Lolium multiflorum | 13 | gene-QYE76_005385, gene-QYE76_005912, gene-QYE76_006405 ... |