Basic Information
Locus ID:
BH07.1796
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH07 | 24299440 | 24301554 | - | BH07.1796 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.91 | 41,154.68 Da | 38.91 | 107.17 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 15 | 53 | 5.8E-7 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 13 | 63 | 2.22E-11 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 102 | 333 | 5.34E-6 | - |
| Gene3D | G3DSA:1.20.1280.50 | - | 13 | 69 | 2.5E-6 | - |
| SMART | SM00256 | fbox_2 | 19 | 58 | 0.0035 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 13 | 66 | 9.470975 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G56420.1 | F-box/RNI-like/FBD-like domains-containing protein. | 2.41E-12 |
| RefSeq | XP_039819445.1 | MEIOTIC F-BOX protein MOF-like [Panicum virgatum] | 8.1E-73 |
| Q7X7A4 | MEIOTIC F-BOX protein MOF OS=Oryza sativa subsp. japonica OX=39947 GN=MOF PE=1 SV=2 | 4.95E-23 | |
| TrEMBL | A0A6G1F236 | F-box domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_038013 PE=4 SV=1 | 2.43E-73 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology