Basic Information
Locus ID:
BH07.15
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Domain Homologous to E6-AP Carboxyl Terminus with
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH07 | 112505 | 148114 | - | BH07.15 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.38 | 309,107.94 Da | 52.78 | 81.28 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00078 | HECTc | 2416 | 2843 | 5.5398E-120 | IPR000569 |
| Pfam | PF00632 | HECT-domain (ubiquitin-transferase) | 2463 | 2848 | 5.2E-81 | IPR000569 |
| Pfam | PF00225 | Kinesin motor domain | 136 | 411 | 5.9E-53 | IPR001752 |
| SUPERFAMILY | SSF48371 | ARM repeat | 1140 | 1611 | 1.11E-36 | IPR016024 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 60 | 418 | 1.43E-65 | IPR027417 |
| SUPERFAMILY | SSF56204 | Hect, E3 ligase catalytic domain | 2409 | 2841 | 4.05E-94 | IPR035983 |
| Gene3D | G3DSA:3.90.1750.10 | Hect, E3 ligase catalytic domains | 2356 | 2609 | 2.6E-43 | - |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 58 | 453 | 3.0E-72 | IPR036961 |
| Gene3D | G3DSA:1.25.10.10 | - | 1129 | 1616 | 7.5E-52 | IPR011989 |
| Gene3D | G3DSA:3.30.2410.10 | Hect, E3 ligase catalytic domain | 2721 | 2846 | 9.0E-31 | - |
| SMART | SM00185 | arm_5 | 1262 | 1302 | 150.0 | IPR000225 |
| SMART | SM00185 | arm_5 | 1305 | 1343 | 17.0 | IPR000225 |
| SMART | SM00119 | hect_3 | 2430 | 2848 | 7.4E-81 | IPR000569 |
| SMART | SM00129 | kinesin_4 | 59 | 424 | 7.3E-33 | IPR001752 |
| SMART | SM00185 | arm_5 | 1172 | 1220 | 20.0 | IPR000225 |
| ProSiteProfiles | PS50237 | HECT domain profile. | 2456 | 2848 | 54.397758 | IPR000569 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 61 | 416 | 58.60107 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 312 | 330 | 4.0E-16 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 165 | 186 | 4.0E-16 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 278 | 295 | 4.0E-16 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 366 | 387 | 4.0E-16 | IPR001752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 79 | 102 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 707 | 728 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 841 | 861 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1947 | 1970 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 561 | 582 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1649 | 1669 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1475 | 1495 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 30 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1006 | 1096 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1613 | 1669 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 798 | 826 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1028 | 1054 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2091 | 2115 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 619 | 648 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 618 | 648 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 801 | 824 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1068 | 1082 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2009 | 2032 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 57 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1613 | 1629 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1947 | 2036 | - | - |
| Coils | Coil | Coil | 506 | 547 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G38600.1 | HEAT repeat ;HECT-domain (ubiquitin-transferase). encodes a member of HECT ubiquitin protein ligase family that is involved in trichome cell morphogenesis. Mutants in this gene exhibit supernumerary trichome branches and increased DNA content. | 0 |
| RefSeq | XP_025807197.1 | LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase UPL3 [Panicum hallii] | 0 |
| Q6WWW4 | E3 ubiquitin-protein ligase UPL3 OS=Arabidopsis thaliana OX=3702 GN=UPL3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6G1CD16 | HECT-type E3 ubiquitin transferase OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_038898 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology