Basic Information
Locus ID:
BH07.1491
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Bulb-type mannose-specific lectin
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH07 | 17202267 | 17206643 | + | BH07.1491 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.93 | 68,448.43 Da | 36.25 | 80.06 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 389 | 582 | 7.7E-39 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 371 | 593 | 4.24E-60 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 458 | 627 | 2.5E-43 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 354 | 457 | 2.3E-20 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 384 | 629 | 33.615612 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 147 | 184 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 262 | 289 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G11410.2 | - | 3.82E-54 |
| RefSeq | XP_025799993.1 | receptor-like serine/threonine-protein kinase SD1-8 [Panicum hallii] | 1.99E-168 |
| Q9ZT07 | G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 OS=Arabidopsis thaliana OX=3702 GN=RKS1 PE=3 SV=3 | 4.1E-53 | |
| TrEMBL | A0A3L6QHJ2 | Receptor-like serine/threonine-protein kinase OS=Panicum miliaceum OX=4540 GN=C2845_PM12G12690 PE=3 SV=1 | 4.15E-169 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 32 | AH01.3355, AH02.1435, AH02.995, AH03.348, AH03.629, AH06.571 ... |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_08G100300, gene-BS78_08G101000 |