Basic Information
Locus ID:
BH07.1476
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
ADP-ribosylation factor GTPase-activating protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH07 | 16920241 | 16929047 | - | BH07.1476 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.41 | 81,312.19 Da | 39.23 | 85.23 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04038 | C2_ArfGAP | 6 | 148 | 1.70285E-73 | - |
| Pfam | PF00168 | C2 domain | 8 | 93 | 6.2E-22 | IPR000008 |
| SUPERFAMILY | SSF49562 | C2 domain (Calcium/lipid-binding domain, CaLB) | 7 | 134 | 4.91E-27 | IPR035892 |
| Gene3D | G3DSA:3.30.420.10 | - | 354 | 538 | 5.7E-22 | IPR036397 |
| Gene3D | G3DSA:2.60.40.150 | C2 domain | 4 | 166 | 1.2E-27 | IPR035892 |
| SMART | SM00239 | C2_3c | 8 | 102 | 6.8E-19 | IPR000008 |
| ProSiteProfiles | PS50004 | C2 domain profile. | 1 | 106 | 18.751987 | IPR000008 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G70810.1 | Calcium-dependent lipid-binding (CaLB domain) family protein. | 5.81E-59 |
| RefSeq | XP_039815237.1 | uncharacterized protein LOC120678149 [Panicum virgatum] | 1.28E-168 |
| A2X479 | GTPase activating protein 1 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_07012 PE=3 SV=1 | 6.19E-90 | |
| TrEMBL | A0A8T0TZP1 | Transposase OS=Panicum virgatum OX=38727 GN=PVAP13_4KG378002 PE=4 SV=1 | 2.72E-165 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology