Basic Information
Locus ID:
BH07.1008
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
U-box domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH07 | 9802012 | 9806957 | + | BH07.1008 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 11.30 | 63,276.88 Da | 75.95 | 65.81 | -0.71 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF57850 | RING/U-box | 140 | 219 | 6.45E-8 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 146 | 176 | 7.9E-6 | IPR013083 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 19 | 33 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 53 | 71 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 127 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 356 | 382 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 244 | 328 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 81 | 122 | - | - |
| Coils | Coil | Coil | 84 | 104 | - | - |
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_039804509.1 | U-box domain-containing protein 39-like [Panicum virgatum] | 7.59E-27 |
| TrEMBL | A0A8T0T6E4 | RING-type E3 ubiquitin transferase OS=Panicum virgatum OX=38727 GN=PVAP13_4NG106900 PE=4 SV=1 | 1.72E-25 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||