HalophFGD

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Basic Information
Locus ID: BH06.579
Species & Taxonomic ID: Echinochloa crus-galli & 90397
Genome Assembly: GWHBDNR00000000
Description: UAS
Maps and Mapping Data
Chromosome Start End Strand ID
BH06 5013733 5014152 + BH06.579
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
4.05 14,058.57 Da 49.76 85.18 0.11
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF14555 UBA-like domain 57 92 1.3E-7 -
Gene3D G3DSA:1.10.8.10 - 40 103 1.0E-8 -
MobiDBLite mobidb-lite consensus disorder prediction 1 20 - -
MobiDBLite mobidb-lite consensus disorder prediction 1 31 - -
KEGG Pathway
KO Term:
K18726 (FAS-associated factor 2)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_052134819.1 plant UBX domain-containing protein 10 [Oryza glaberrima] 4.56E-8
TrEMBL A0A2T7E295 UBA domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_4G315400 PE=4 SV=1 2.52E-39
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 1 BH06.579
Poaceae Oryza sativa 1 LOC_Os06g36760.1
Posidoniaceae Posidonia oceanica 7 gene.Posoc02g28380, gene.Posoc03g18980, gene.Posoc04g01100 ...
gene.Posoc04g10940, gene.Posoc08g10340, gene.Posoc10g00890, gene.Posoc10g04350
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.