Basic Information
Locus ID:
BH06.520
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH06 | 4555881 | 4562170 | - | BH06.520 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.86 | 96,917.64 Da | 54.88 | 66.50 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 111 | 387 | 1.56093E-87 | - |
| CDD | cd01958 | HPS_like | 819 | 901 | 1.43604E-32 | IPR027923 |
| Pfam | PF14547 | Hydrophobic seed protein | 819 | 902 | 3.3E-28 | IPR027923 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 109 | 384 | 2.7E-47 | IPR001245 |
| SUPERFAMILY | SSF47699 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin | 822 | 903 | 9.96E-20 | IPR036312 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 88 | 400 | 1.66E-78 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 79 | 190 | 2.8E-30 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 191 | 404 | 5.6E-62 | - |
| Gene3D | G3DSA:1.10.110.10 | - | 819 | 903 | 1.4E-22 | IPR036312 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 105 | 387 | 37.445927 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 233 | 245 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 111 | 143 | - | IPR017441 |
| PRINTS | PR01217 | Proline rich extensin signature | 730 | 742 | 1.9E-18 | - |
| PRINTS | PR01217 | Proline rich extensin signature | 792 | 813 | 1.9E-18 | - |
| PRINTS | PR01217 | Proline rich extensin signature | 746 | 762 | 1.9E-18 | - |
| PRINTS | PR01217 | Proline rich extensin signature | 780 | 792 | 1.9E-18 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 472 | 492 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 391 | 457 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 789 | 814 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 687 | 725 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G01300.1 | Protein kinase superfamily protein. | 1.26E-157 |
| RefSeq | XP_021305692.1 | receptor-like serine/threonine-protein kinase At3g01300 isoform X2 [Sorghum bicolor] | 4.39E-271 |
| Q9SRH7 | Serine/threonine-protein kinase PBL35 OS=Arabidopsis thaliana OX=3702 GN=PBL35 PE=1 SV=1 | 1.21E-156 | |
| TrEMBL | A0A194YHG1 | Protein kinase domain-containing protein OS=Sorghum bicolor OX=4558 GN=SORBI_3010G054900 PE=3 SV=1 | 9.94E-270 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
No orthogroup found for BH06.520.