Basic Information
Locus ID:
BH06.453
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH06 | 4076776 | 4080981 | + | BH06.453 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.17 | 66,437.88 Da | 52.06 | 99.68 | -0.15 |
Protein Domain:
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G56400.1 | FBD, F-box, Skp2-like and Leucine Rich Repeat domains containing protein. | 2.06E-8 |
| RefSeq | XP_034590521.1 | uncharacterized protein LOC117852521 [Setaria viridis] | 7.36E-115 |
| Q9FM91 | Putative FBD-associated F-box protein At5g56400 OS=Arabidopsis thaliana OX=3702 GN=At5g56400 PE=4 SV=2 | 2.04E-7 | |
| TrEMBL | A0A8T0TD48 | F-box domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_4KG051500 PE=4 SV=1 | 1.28E-124 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 21 | AH01.379, AH06.351, BH01.347, BH01.349, BH01.350, BH01.351 ... |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_4BG0334820 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_006876 |
| Poaceae | Oryza coarctata | 6 | Oco05G027310, Oco09G009330, Oco15G005400, Oco21G001910 ... |
| Poaceae | Oryza sativa | 2 | LOC_Os03g25670.1, LOC_Os08g17110.1 |
| Poaceae | Paspalum vaginatum | 9 | gene-BS78_01G032200, gene-BS78_01G344200, gene-BS78_K091300 ... |
| Poaceae | Sporobolus alterniflorus | 3 | Chr01G001580, Chr12G033300, Chr23G004370 |