Basic Information
Locus ID:
BH06.449
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH06 | 4043642 | 4048284 | + | BH06.449 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.84 | 69,886.52 Da | 51.11 | 88.18 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF81383 | F-box domain | 25 | 82 | 1.16E-5 | IPR036047 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 511 | 589 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 565 | 579 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 170 | 193 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G50270.1 | F-box/RNI-like/FBD-like domains-containing protein. | 4.46E-7 |
| RefSeq | XP_039841552.1 | uncharacterized protein LOC120701803 [Panicum virgatum] | 8.6E-169 |
| Q9FGR8 | Putative FBD-associated F-box protein At5g50270 OS=Arabidopsis thaliana OX=3702 GN=At5g50270 PE=4 SV=2 | 4.42E-6 | |
| TrEMBL | A0A1E5W5U8 | F-box domain-containing protein OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0006218 PE=4 SV=1 | 1.9E-194 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 21 | AH01.379, AH06.351, BH01.347, BH01.349, BH01.350, BH01.351 ... |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_4BG0334820 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_006876 |
| Poaceae | Oryza coarctata | 6 | Oco05G027310, Oco09G009330, Oco15G005400, Oco21G001910 ... |
| Poaceae | Oryza sativa | 2 | LOC_Os03g25670.1, LOC_Os08g17110.1 |
| Poaceae | Paspalum vaginatum | 9 | gene-BS78_01G032200, gene-BS78_01G344200, gene-BS78_K091300 ... |
| Poaceae | Sporobolus alterniflorus | 3 | Chr01G001580, Chr12G033300, Chr23G004370 |