Basic Information
Locus ID:
BH06.351
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH06 | 3133967 | 3142820 | - | BH06.351 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.55 | 87,663.79 Da | 51.63 | 84.05 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd12420 | RRM_RBPMS_like | 153 | 235 | 3.63781E-29 | - |
| CDD | cd06623 | PKc_MAPKK_plant_like | 516 | 776 | 4.6096E-141 | - |
| Pfam | PF00069 | Protein kinase domain | 520 | 772 | 1.6E-66 | IPR000719 |
| Pfam | PF00076 | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 155 | 226 | 6.3E-12 | IPR000504 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 515 | 780 | 2.7E-81 | IPR011009 |
| SUPERFAMILY | SSF54928 | RNA-binding domain, RBD | 147 | 226 | 9.67E-14 | IPR035979 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 506 | 597 | 1.4E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 598 | 792 | 3.7E-61 | - |
| Gene3D | G3DSA:3.30.70.330 | - | 147 | 241 | 8.3E-19 | IPR012677 |
| SMART | SM00220 | serkin_6 | 518 | 772 | 2.9E-85 | IPR000719 |
| SMART | SM00360 | rrm1_1 | 154 | 231 | 1.4E-8 | IPR000504 |
| ProSiteProfiles | PS50102 | Eukaryotic RNA Recognition Motif (RRM) profile. | 153 | 239 | 12.730889 | IPR000504 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 518 | 772 | 47.057045 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 636 | 648 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 524 | 547 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 24 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 26 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G29810.1 | MAP kinase kinase 2. encodes a MAP kinase kinase 2 that regulates MPK6 and MPK4 in response to cold and salt stresses. Co-expression with MEKK1 in protoplasts activated MKK2 activity, suggesting that MEKK1 may be a regulator of MKK2. | 1.56E-147 |
| RefSeq | XP_004964561.1 | mitogen-activated protein kinase kinase 2 [Setaria italica] | 3.48E-215 |
| A0A1S4CGX4 | Mitogen-activated protein kinase kinase SIPKK OS=Nicotiana tabacum OX=4097 GN=SIPKK PE=1 SV=1 | 6.04E-153 | |
| TrEMBL | A0A811SAX3 | Protein kinase domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS61815 PE=4 SV=1 | 1.4E-284 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology