Basic Information
Locus ID:
BH06.2876
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH06 | 34920399 | 34922802 | - | BH06.2876 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.74 | 83,061.80 Da | 48.44 | 86.91 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 74 | 249 | 2.86678E-24 | - |
| Pfam | PF00069 | Protein kinase domain | 490 | 753 | 1.2E-33 | IPR000719 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 108 | 216 | 2.93E-5 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 489 | 748 | 3.55E-52 | IPR011009 |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 83 | 248 | 1.7E-6 | IPR014729 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 468 | 758 | 1.4E-57 | - |
| SMART | SM00220 | serkin_6 | 481 | 755 | 8.0E-14 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 481 | 756 | 30.336523 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 609 | 621 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 33 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 47 | 68 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 13 | 33 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 343 | 360 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 339 | 360 | - | - |
| Coils | Coil | Coil | 343 | 453 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45910.1 | U-box domain-containing protein kinase family protein. | 1.54E-93 |
| RefSeq | XP_012700813.1 | U-box domain-containing protein 33 [Setaria italica] | 6.73E-232 |
| Q8GUH1 | U-box domain-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=PUB33 PE=2 SV=2 | 1.5E-92 | |
| TrEMBL | K3Y0Y6 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=101758262 PE=4 SV=1 | 1.52E-230 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 3 | AH06.3077, BH06.2876, CH06.990 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_6AG0551760, gene-QOZ80_6BG0505340 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr02G033750 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-9501 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g31192 |