Basic Information
Locus ID:
BH06.2822
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the glycosyltransferase 8 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH06 | 34412735 | 34415611 | - | BH06.2822 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.74 | 79,776.96 Da | 46.20 | 83.71 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06429 | GT8_like_1 | 384 | 682 | 1.1946E-119 | - |
| Pfam | PF01501 | Glycosyl transferase family 8 | 344 | 668 | 1.4E-89 | IPR002495 |
| SUPERFAMILY | SSF53448 | Nucleotide-diphospho-sugar transferases | 384 | 692 | 2.11E-64 | IPR029044 |
| Gene3D | G3DSA:3.90.550.10 | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 385 | 692 | 2.5E-40 | IPR029044 |
| Coils | Coil | Coil | 172 | 192 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G38270.2 | galacturonosyltransferase 3. Encodes a protein with putative galacturonosyltransferase activity. | 2.35E-263 |
| RefSeq | XP_039804637.1 | probable galacturonosyltransferase 3 [Panicum virgatum] | 0 |
| Q0WQD2 | Probable galacturonosyltransferase 3 OS=Arabidopsis thaliana OX=3702 GN=GAUT3 PE=2 SV=2 | 2.99E-261 | |
| TrEMBL | A0A8T0TQK4 | Hexosyltransferase OS=Panicum virgatum OX=38727 GN=PVAP13_4KG383203 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology