Basic Information
Locus ID:
BH06.2772
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH06 | 34038856 | 34042626 | - | BH06.2772 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.99 | 103,782.02 Da | 48.36 | 96.05 | 0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 157 | 213 | 6.1E-7 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 565 | 579 | 0.37 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 686 | 964 | 3.6E-41 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 22 | 70 | 5.1E-6 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 104 | 119 | 0.35 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 94 | 416 | 1.97E-61 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 350 | 606 | 8.16E-55 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 679 | 964 | 1.6E-69 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 765 | 978 | 1.8E-56 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 219 | 301 | 2.5E-21 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 652 | 764 | 2.2E-18 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 22 | 218 | 1.3E-28 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 302 | 614 | 5.2E-92 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 179 | 203 | 92.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 276 | 299 | 33.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 468 | 491 | 190.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 325 | 349 | 83.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 492 | 516 | 16.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 683 | 964 | 5.5E-28 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 540 | 564 | 180.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 252 | 275 | 120.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 683 | 981 | 36.272804 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 809 | 821 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 77 | 100 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 69 | 100 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G75820.1 | Leucine-rich receptor-like protein kinase family protein. Putative receptor kinase with an extracellular leucine-rich domain. Controls shoot and floral meristem size, and contributes to establish and maintain floral meristem identity. Negatively regulated by KAPP (kinase-associated protein phosphatase). CLV3 peptide binds directly CLV1 ectodomain. | 6.77E-130 |
| RefSeq | XP_004966471.1 | leucine-rich repeat receptor-like kinase protein THICK TASSEL DWARF1 [Setaria italica] | 2.05E-234 |
| P0DL10 | Leucine-rich repeat receptor-like kinase protein THICK TASSEL DWARF1 OS=Zea mays OX=4577 GN=TD1 PE=2 SV=1 | 1.93E-200 | |
| TrEMBL | K3XV02 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=101763793 PE=3 SV=1 | 4.64E-233 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology