HalophFGD

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Basic Information
Locus ID: BH06.2751
Species & Taxonomic ID: Echinochloa crus-galli & 90397
Genome Assembly: GWHBDNR00000000
Description: F-box domain
Maps and Mapping Data
Chromosome Start End Strand ID
BH06 33843927 33844779 - BH06.2751
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
10.11 23,510.81 Da 72.55 73.62 -0.37
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Best hit
Source Best Hit ID Description E-value
RefSeq XP_039804530.1 putative F-box protein At2g02030 isoform X6 [Panicum virgatum] 3.59E-63
TrEMBL A0A8T0TE25 F-box domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_4NG332600 PE=4 SV=1 3.67E-62
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Arecaceae Phoenix dactylifera 1 gene-LOC103709993
Asparagaceae Asparagus officinalis 1 AsparagusV1_06.187.V1.1
Poaceae Echinochloa crus-galli 24 AH02.2990, AH07.122, AH07.134, AH09.801, BH01.2596, BH07.313 ...
BH05.3914, BH05.3915, BH06.2751, BH07.2057, BH07.71, BH09.200, CH01.2792, CH02.1075, CH03.4547, CH03.4708, CH03.4731, CH03.4734, CH03.4757, CH03.4758, CH04.1894, CH05.2057, CH05.4128, CH05.4444
Poaceae Eleusine coracana subsp. coracana 13 gene-QOZ80_1BG0057680, gene-QOZ80_2AG0105300 ...
gene-QOZ80_2BG0152490, gene-QOZ80_3BG0286140, gene-QOZ80_3BG0297760, gene-QOZ80_4AG0320530, gene-QOZ80_4AG0320550, gene-QOZ80_4AG0322110, gene-QOZ80_4AG0322130, gene-QOZ80_4BG0348890, gene-QOZ80_4BG0351940, gene-QOZ80_4BG0351950, gene-QOZ80_6AG0536790
Poaceae Hordeum vulgare 11 HORVU.MOREX.r3.2HG0122350.1.CDS1 ...
HORVU.MOREX.r3.2HG0132050.1.CDS1, HORVU.MOREX.r3.2HG0168030.1.CDS1, HORVU.MOREX.r3.2HG0168040.1.CDS1, HORVU.MOREX.r3.2HG0194150.1.CDS1, HORVU.MOREX.r3.2HG0194780.1.CDS1, HORVU.MOREX.r3.3HG0221170.1.CDS1, HORVU.MOREX.r3.5HG0530150.1.CDS1, HORVU.MOREX.r3.6HG0543810.1.CDS1, HORVU.MOREX.r3.7HG0637410.1.CDS1, HORVU.MOREX.r3.7HG0637430.1.CDS1
Poaceae Lolium multiflorum 28 gene-QYE76_006812, gene-QYE76_018860, gene-QYE76_025880 ...
gene-QYE76_026959, gene-QYE76_026965, gene-QYE76_036377, gene-QYE76_036382, gene-QYE76_037512, gene-QYE76_038561, gene-QYE76_039703, gene-QYE76_039705, gene-QYE76_043546, gene-QYE76_044498, gene-QYE76_048448, gene-QYE76_049122, gene-QYE76_049815, gene-QYE76_052134, gene-QYE76_057658, gene-QYE76_057659, gene-QYE76_057662, gene-QYE76_057663, gene-QYE76_057664, gene-QYE76_058817, gene-QYE76_058828, gene-QYE76_060553, gene-QYE76_061038, gene-QYE76_066315, gene-QYE76_071663
Poaceae Oryza coarctata 12 Oco01G010480, Oco01G023330, Oco02G015220, Oco03G010080 ...
Oco05G014210, Oco07G003900, Oco07G003910, Oco07G004650, Oco12G003190, Oco12G003280, Oco18G006330, Oco23G002440
Poaceae Oryza sativa 18 LOC_Os01g45020.2, LOC_Os02g15680.1, LOC_Os02g27400.1 ...
LOC_Os02g51580.1, LOC_Os03g25080.1, LOC_Os04g31530.1, LOC_Os04g31540.1, LOC_Os04g31570.1, LOC_Os06g07380.1, LOC_Os06g07450.1, LOC_Os06g07460.1, LOC_Os06g19670.1, LOC_Os08g29400.1, LOC_Os09g27520.1, LOC_Os09g27570.1, LOC_Os09g27660.3, LOC_Os10g24870.1, LOC_Os12g38090.1
Poaceae Paspalum vaginatum 8 gene-BS78_03G214100, gene-BS78_03G214200 ...
gene-BS78_04G106800, gene-BS78_06G017700, gene-BS78_06G065900, gene-BS78_09G211600, gene-BS78_10G223700, gene-BS78_10G275800
Poaceae Puccinellia tenuiflora 23 Pt_Chr0100567, Pt_Chr0100612, Pt_Chr0101012, Pt_Chr0204969 ...
Pt_Chr0204971, Pt_Chr0206814, Pt_Chr0305310, Pt_Chr0305585, Pt_Chr0305651, Pt_Chr0305654, Pt_Chr0401364, Pt_Chr0500386, Pt_Chr0500513, Pt_Chr0500567, Pt_Chr0501495, Pt_Chr0501772, Pt_Chr0501783, Pt_Chr0603263, Pt_Chr0605307, Pt_Chr0605309, Pt_Chr0703331, Pt_Chr0703332, Pt_Ctg00334
Poaceae Sporobolus alterniflorus 10 Chr06G014710, Chr15G016750, Chr15G024360, Chr19G008640 ...
Chr20G006730, Chr23G015000, Chr26G004820, Chr27G007850, Chr27G007860, Chr29G006440
Poaceae Thinopyrum elongatum 11 Tel2E01G205100, Tel2E01G562900, Tel2E01G764100 ...
Tel2E01G788800, Tel3E01G082500, Tel3E01G810100, Tel5E01G799100, Tel6E01G117000, Tel6E01G363400, Tel7E01G056400, Telscf40501G000100
Poaceae Triticum dicoccoides 6 gene_TRIDC1BG061400, gene_TRIDC3AG074610 ...
gene_TRIDC3BG030670, gene_TRIDC3BG030700, gene_TRIDC6BG030800, gene_TRIDC7AG078480
Poaceae Triticum aestivum 43 TraesCS2A02G341300.1.cds1, TraesCS2B02G104500.1.cds1 ...
TraesCS2B02G151400.1.cds1, TraesCS2B02G196900.1, TraesCS2B02G339000.1, TraesCS2B02G490300.1.cds1, TraesCS2D02G093200.1.cds1, TraesCS2D02G131500.1.cds1, TraesCS2D02G318900.1.cds1, TraesCS2D02G441600.1.cds1, TraesCS2D02G441700.1.cds1, TraesCS2D02G449800.1, TraesCS3A02G001000.1.cds1, TraesCS3A02G037400.1.cds1, TraesCS3A02G526900.1.cds1, TraesCS3B02G002100.1.cds1, TraesCS3B02G046300.1.cds1, TraesCS3B02G046400.1.cds1, TraesCS3B02G178900.1, TraesCS3B02G179000.1.cds1, TraesCS3B02G210700.1, TraesCS3B02G210800.1, TraesCS3D02G042200.1.cds1, TraesCS3D02G532600.1.cds1, TraesCS4A02G356900.1, TraesCS4A02G461900.1.cds1, TraesCS4B02G001400.1.cds1, TraesCS4B02G060900.1.cds1, TraesCS4B02G061700.1.cds1, TraesCS5A02G197600.1.cds1, TraesCS5A02G200300.1, TraesCS5B02G198900.1.cds1, TraesCS5B02G515700.1.cds1, TraesCS5D02G030900.1.cds1, TraesCS6B02G201900.1, TraesCS6B02G202100.1, TraesCS7A02G027600.1.cds1, TraesCS7A02G569200.1.cds1, TraesCS7B02G489400.1.cds1, TraesCS7D02G009500.1.cds1, TraesCSU02G055600.1.cds1, TraesCSU02G184600.1.cds1, TraesCSU02G184700.1.cds1
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