Basic Information
Locus ID:
BH06.2422
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Broad-Complex, Tramtrack and Bric a brac
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH06 | 30707416 | 30708616 | - | BH06.2422 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.83 | 38,697.61 Da | 39.17 | 95.86 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 18 | 137 | 1.1256E-7 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 172 | 277 | 5.5E-23 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 156 | 277 | 3.73E-27 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 14 | 142 | 4.74E-10 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 153 | 275 | 4.2E-33 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 281 | 347 | 1.4E-19 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 16 | 141 | 9.5E-8 | IPR008974 |
| SMART | SM00225 | BTB_4 | 176 | 281 | 4.3E-21 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 176 | 238 | 16.569328 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 8.82E-66 |
| RefSeq | XP_039844400.1 | BTB/POZ and MATH domain-containing protein 1-like [Panicum virgatum] | 2.57E-151 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 8.54E-65 | |
| TrEMBL | A0A1E5ULY1 | BTB/POZ and MATH domain-containing protein 2 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0025099 PE=4 SV=1 | 1.47E-157 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology