Basic Information
Locus ID:
BH06.2302
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein-only RNase P
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH06 | 29621515 | 29624035 | + | BH06.2302 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.07 | 63,137.54 Da | 48.29 | 75.46 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 90 | 302 | 3.6E-83 | IPR033443 |
| Pfam | PF16953 | Protein-only RNase P | 342 | 568 | 3.2E-72 | IPR031595 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 98 | 571 | 3.7E-224 | IPR011990 |
| Gene3D | G3DSA:3.40.50.11980 | - | 360 | 534 | 3.7E-224 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 85 | 99 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 45 | 99 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G32230.1 | proteinaceous RNase P 1. RNase P able to cleave tRNA-like structures involved in the maturation of plant mitochondrial mRNAs. | 2.04E-204 |
| RefSeq | XP_025812230.1 | proteinaceous RNase P 1, chloroplastic/mitochondrial-like isoform X2 [Panicum hallii] | 0 |
| Q66GI4 | Proteinaceous RNase P 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PRORP1 PE=1 SV=1 | 1.96E-203 | |
| TrEMBL | A0A2S3HHW9 | ribonuclease P OS=Panicum hallii OX=206008 GN=PAHAL_4G062000 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology