Basic Information
Locus ID:
BH06.1946
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH06 | 25874218 | 25881091 | + | BH06.1946 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.71 | 163,583.69 Da | 50.27 | 98.18 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 147 | 206 | 6.2E-11 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 655 | 713 | 4.7E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 31 | 69 | 2.3E-9 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 825 | 1105 | 8.0E-35 | IPR001245 |
| Pfam | PF12799 | Leucine Rich repeats (2 copies) | 412 | 446 | 3.1E-7 | IPR025875 |
| SUPERFAMILY | SSF52058 | L domain-like | 29 | 285 | 7.48E-58 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 802 | 1107 | 6.51E-62 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 294 | 708 | 1.02E-63 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 186 | 2.8E-47 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 606 | 745 | 6.2E-38 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 285 | 385 | 3.7E-27 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 902 | 1123 | 4.1E-52 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 187 | 284 | 2.8E-27 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 387 | 605 | 1.1E-54 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 782 | 901 | 8.1E-19 | - |
| SMART | SM00369 | LRR_typ_2 | 433 | 461 | 55.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 628 | 652 | 41.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 121 | 145 | 94.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 169 | 192 | 130.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 533 | 557 | 32.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 313 | 337 | 150.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 700 | 725 | 24.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 193 | 217 | 6.1 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 97 | 120 | 74.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 820 | 1116 | 32.597965 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1211 | 1238 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1335 | 1358 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1338 | 1352 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1205 | 1249 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G47110.1 | Leucine-rich repeat protein kinase family protein. | 9.15E-80 |
| RefSeq | XP_039843882.1 | probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Panicum virgatum] | 1.27E-296 |
| Q2R2D5 | Receptor kinase-like protein Xa21 OS=Oryza sativa subsp. japonica OX=39947 GN=XA21 PE=1 SV=1 | 4.41E-83 | |
| TrEMBL | A0A8T0TU85 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_4KG301300 PE=3 SV=1 | 1.02E-290 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||