Basic Information
Locus ID:
BH06.1893
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
RING-type E3 ubiquitin transferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH06 | 25089039 | 25091348 | - | BH06.1893 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.38 | 39,796.07 Da | 72.64 | 78.39 | -0.26 |
Protein Domain:
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_025812487.1 | U-box domain-containing protein 9 isoform X3 [Panicum hallii] | 4.69E-23 |
| TrEMBL | A0A3L6RS13 | RING-type E3 ubiquitin transferase OS=Panicum miliaceum OX=4540 GN=C2845_PM11G03080 PE=4 SV=1 | 1.65E-22 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 1 | BH06.1893 |
| Poaceae | Lolium multiflorum | 3 | gene-QYE76_038730, gene-QYE76_052609, gene-QYE76_070369 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr30G013050 |
| Poaceae | Zea mays | 1 | Zm00001eb241160_P002 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-7973 |