Basic Information
Locus ID:
BH06.1839
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH06 | 24535788 | 24539067 | + | BH06.1839 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.51 | 113,427.22 Da | 41.49 | 94.92 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 711 | 996 | 1.37969E-90 | - |
| Pfam | PF13855 | Leucine rich repeat | 519 | 579 | 9.7E-11 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 36 | 72 | 1.6E-8 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 308 | 367 | 3.7E-7 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 708 | 994 | 3.7E-40 | IPR001245 |
| SUPERFAMILY | SSF52047 | RNI-like | 347 | 607 | 1.1E-37 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 62 | 396 | 8.84E-58 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 697 | 995 | 1.32E-70 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 399 | 639 | 3.4E-49 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 160 | 398 | 2.5E-58 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 689 | 797 | 4.0E-20 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 35 | 159 | 1.1E-24 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 798 | 1010 | 6.0E-58 | - |
| SMART | SM00369 | LRR_typ_2 | 307 | 329 | 120.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 705 | 1001 | 8.3E-38 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 109 | 133 | 26.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 566 | 590 | 35.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 210 | 234 | 73.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 541 | 565 | 15.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 185 | 208 | 410.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 354 | 378 | 66.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 259 | 283 | 160.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 330 | 353 | 390.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 705 | 995 | 37.17738 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 846 | 858 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 566 | 579 | 1.9E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 309 | 322 | 1.9E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1026 | 1058 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1018 | 1058 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 3.5E-109 |
| RefSeq | XP_039806376.1 | LRR receptor-like serine/threonine-protein kinase HSL2 [Panicum virgatum] | 0 |
| P47735 | Receptor-like protein kinase 5 OS=Arabidopsis thaliana OX=3702 GN=RLK5 PE=1 SV=1 | 8.46E-73 | |
| TrEMBL | A0A3L6PFC2 | Receptor-like protein kinase 5 OS=Panicum miliaceum OX=4540 GN=C2845_PM10G14480 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology