Basic Information
Locus ID:
BH06.1345
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Mitogen-activated protein kinase kinase kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH06 | 14672446 | 14673204 | - | BH06.1345 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.06 | 25,689.01 Da | 72.22 | 59.44 | -0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 92 | 189 | 9.5E-23 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 93 | 204 | 1.34E-29 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 91 | 246 | 3.5E-32 | - |
| SMART | SM00220 | serkin_6 | 21 | 245 | 5.5E-5 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 252 | 19.594683 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 89 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 215 | 252 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 38 | 71 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 200 | 252 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G32510.1 | mitogen-activated protein kinase kinase kinase 17. member of MEKK subfamily | 2.92E-25 |
| RefSeq | XP_039811959.1 | mitogen-activated protein kinase kinase kinase 17-like [Panicum virgatum] | 1.75E-49 |
| O80888 | Mitogen-activated protein kinase kinase kinase 17 OS=Arabidopsis thaliana OX=3702 GN=MAPKKK17 PE=1 SV=1 | 2.87E-24 | |
| TrEMBL | A0A835BET4 | Protein kinase domain-containing protein OS=Digitaria exilis OX=1010633 GN=HU200_037011 PE=3 SV=1 | 5.31E-49 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-1026 |
| Poaceae | Echinochloa crus-galli | 1 | BH06.1345 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr16G014140 |