HalophFGD

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Basic Information
Locus ID: BH06.1098
Species & Taxonomic ID: Echinochloa crus-galli & 90397
Genome Assembly: GWHBDNR00000000
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
BH06 10717727 10718749 - BH06.1098
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
9.54 36,667.23 Da 64.72 82.56 -0.32
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF81383 F-box domain 169 251 8.5E-7 IPR036047
Coils Coil Coil 198 218 - -
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_039803694.1 F-box protein At1g70360-like [Panicum virgatum] 4.3E-31
TrEMBL A0A8T0MTP9 F-box domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_9NG418900 PE=4 SV=1 1.53E-42
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 4 BH01.2963, BH01.4175, BH06.1098, CH01.4454
Poaceae Eleusine coracana subsp. coracana 1 gene-QOZ80_3BG0275730
Poaceae Paspalum vaginatum 1 gene-BS78_01G265600
Poaceae Sporobolus alterniflorus 6 Chr02G008660, Chr03G017000, Chr03G017010, Chr05G024820 ...
Chr08G017000, Chr08G017010
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.