Basic Information
Locus ID:
BH05.642
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
DNA (cytosine-5-)-methyltransferase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH05 | 5493542 | 5502126 | + | BH05.642 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.92 | 148,613.80 Da | 45.48 | 73.87 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18635 | CD_CMT3_like | 906 | 962 | 4.36587E-32 | - |
| Pfam | PF01426 | BAH domain | 647 | 759 | 1.9E-9 | IPR001025 |
| Pfam | PF00145 | C-5 cytosine-specific DNA methylase | 968 | 1331 | 2.4E-36 | IPR001525 |
| Pfam | PF00385 | Chromo (CHRromatin Organisation MOdifier) domain | 909 | 960 | 1.7E-8 | IPR023780 |
| SUPERFAMILY | SSF54160 | Chromo domain-like | 894 | 964 | 2.93E-13 | IPR016197 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 800 | 1332 | 4.01E-76 | IPR029063 |
| Gene3D | G3DSA:3.90.120.10 | DNA Methylase, subunit A, domain 2 | 1129 | 1298 | 3.1E-56 | - |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 749 | 1128 | 2.3E-154 | - |
| Gene3D | G3DSA:2.30.30.490 | - | 581 | 748 | 8.6E-47 | IPR043151 |
| SMART | SM00439 | BAH_4 | 646 | 763 | 3.4E-15 | IPR001025 |
| SMART | SM00298 | chromo_7 | 906 | 965 | 2.6E-7 | IPR000953 |
| ProSiteProfiles | PS51679 | C-5 cytosine-specific DNA methylase (Dnmt) domain profile. | 801 | 1339 | 46.589836 | IPR001525 |
| ProSiteProfiles | PS51038 | BAH domain profile. | 646 | 763 | 17.840076 | IPR001025 |
| ProSiteProfiles | PS50013 | Chromo and chromo shadow domain profile. | 907 | 960 | 11.109501 | IPR000953 |
| ProSitePatterns | PS00095 | C-5 cytosine-specific DNA methylases C-terminal signature. | 1314 | 1332 | - | IPR031303 |
| ProSitePatterns | PS00094 | C-5 cytosine-specific DNA methylases active site. | 977 | 989 | - | IPR018117 |
| ProSitePatterns | PS00598 | Chromo domain signature. | 930 | 950 | - | IPR023779 |
| PRINTS | PR00105 | Cytosine-specific DNA methyltransferase signature | 1020 | 1034 | 1.8E-11 | IPR001525 |
| PRINTS | PR00105 | Cytosine-specific DNA methyltransferase signature | 802 | 818 | 1.8E-11 | IPR001525 |
| PRINTS | PR00105 | Cytosine-specific DNA methyltransferase signature | 1066 | 1079 | 1.8E-11 | IPR001525 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 84 | 118 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 516 | 543 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 27 | 51 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 27 | 42 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 84 | 102 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 286 | 309 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 143 | 174 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Module:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G19020.2 | - | 2.63E-273 |
| RefSeq | XP_025806233.1 | DNA (cytosine-5)-methyltransferase CMT2-like isoform X1 [Panicum hallii] | 0 |
| Q5KQL9 | DNA (cytosine-5)-methyltransferase CMT2 OS=Oryza sativa subsp. japonica OX=39947 GN=CMT2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A2S3H701 | DNA (cytosine-5-)-methyltransferase OS=Panicum hallii OX=206008 GN=PAHAL_3G074800 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology