Basic Information
Locus ID:
BH05.601
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Lectin-domain containing receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH05 | 5073836 | 5081116 | - | BH05.601 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.16 | 110,924.38 Da | 36.98 | 83.25 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01657 | Salt stress response/antifungal | 181 | 263 | 8.2E-8 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 61 | 159 | 1.4E-18 | IPR002902 |
| Pfam | PF00069 | Protein kinase domain | 685 | 961 | 3.8E-44 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 361 | 636 | 9.2E-49 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 344 | 660 | 8.9E-75 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 665 | 969 | 8.5E-70 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 668 | 760 | 4.5E-23 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 171 | 266 | 1.1E-11 | IPR038408 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 344 | 436 | 2.7E-24 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 761 | 973 | 1.3E-53 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 437 | 644 | 3.0E-54 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 55 | 162 | 3.3E-22 | IPR038408 |
| SMART | SM00220 | serkin_6 | 681 | 963 | 1.8E-25 | IPR000719 |
| SMART | SM00220 | serkin_6 | 360 | 638 | 1.2E-34 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 55 | 162 | 18.353584 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 681 | 964 | 36.922966 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 360 | 652 | 39.212677 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 167 | 266 | 12.976635 | IPR002902 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 484 | 496 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 687 | 714 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 812 | 824 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 366 | 389 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 983 | 1007 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 276 | 299 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 983 | 1017 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G10530.1 | Concanavalin A-like lectin protein kinase family protein. | 2.98E-65 |
| RefSeq | XP_040384174.1 | cysteine-rich receptor-like protein kinase 8 [Oryza brachyantha] | 4.81E-156 |
| Q9LXA5 | L-type lectin-domain containing receptor kinase IX.1 OS=Arabidopsis thaliana OX=3702 GN=LECRK91 PE=1 SV=1 | 2.91E-64 | |
| TrEMBL | A0A1E5W0P5 | L-type lectin-domain containing receptor kinase VIII.1 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0008049 PE=4 SV=1 | 7.93E-247 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 3 | BH05.601, CH01.3028, CH04.309 |
| Poaceae | Lolium multiflorum | 6 | gene-QYE76_003593, gene-QYE76_017906, gene-QYE76_019077 ... |
| Poaceae | Oryza coarctata | 1 | Oco09G005110 |
| Poaceae | Oryza sativa | 1 | LOC_Os10g10540.1 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_05G170900, gene-BS78_08G007300 |
| Poaceae | Puccinellia tenuiflora | 5 | Pt_Chr0106389, Pt_Chr0106422, Pt_Chr0501231, Pt_Chr0604613 ... |
| Poaceae | Sporobolus alterniflorus | 2 | Chr09G007730, Chr13G017140 |
| Poaceae | Thinopyrum elongatum | 8 | Tel1E01G497600, Tel2E01G092800, Tel2E01G1016400 ... |
| Poaceae | Triticum aestivum | 6 | TraesCS2B02G628100.1, TraesCS2B02G628200.1 ... |