Basic Information
Locus ID:
BH05.578
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
von Willebrand factor type A domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH05 | 4882785 | 4884476 | - | BH05.578 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.00 | 56,163.62 Da | 33.79 | 86.51 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14624 | VWA / Hh protein intein-like | 403 | 472 | 2.8E-12 | IPR032838 |
| Pfam | PF00092 | von Willebrand factor type A domain | 60 | 217 | 1.7E-23 | IPR002035 |
| SUPERFAMILY | SSF53300 | vWA-like | 57 | 215 | 4.9E-29 | IPR036465 |
| Gene3D | G3DSA:3.40.50.410 | von Willebrand factor, type A domain | 60 | 228 | 1.6E-38 | IPR036465 |
| SMART | SM00327 | VWA_4 | 58 | 227 | 3.1E-21 | IPR002035 |
| ProSiteProfiles | PS50234 | VWFA domain profile. | 60 | 230 | 18.934841 | IPR002035 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G60710.1 | Zinc finger (C3HC4-type RING finger) family protein. | 1.23E-43 |
| RefSeq | XP_039798718.1 | E3 ubiquitin-protein ligase WAV3-like [Panicum virgatum] | 4.6E-243 |
| Q61704 | Inter-alpha-trypsin inhibitor heavy chain H3 OS=Mus musculus OX=10090 GN=Itih3 PE=1 SV=3 | 6.78E-9 | |
| TrEMBL | A0A8T0TZN3 | VWFA domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_3NG054000 PE=4 SV=1 | 1.04E-241 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology