Basic Information
Locus ID:
BH05.4249
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
thaumatin-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH05 | 48623202 | 48623429 | - | BH05.4249 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.44 | 7,899.68 Da | 52.28 | 58.53 | 0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00314 | Thaumatin family | 1 | 34 | 3.9E-7 | IPR001938 |
| SUPERFAMILY | SSF49870 | Osmotin, thaumatin-like protein | 1 | 75 | 1.24E-20 | IPR037176 |
| Gene3D | G3DSA:2.60.110.10 | Thaumatin | 45 | 75 | 1.4E-6 | IPR037176 |
| Gene3D | G3DSA:2.60.110.10 | Thaumatin | 1 | 44 | 6.7E-10 | IPR037176 |
| SMART | SM00205 | tha2 | 2 | 75 | 1.4E-4 | IPR001938 |
| ProSiteProfiles | PS51367 | Thaumatin family profile. | 1 | 75 | 16.496273 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 65 | 74 | 6.7E-9 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 16 | 32 | 6.7E-9 | IPR001938 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G75800.1 | Pathogenesis-related thaumatin superfamily protein. | 1.01E-7 |
| RefSeq | XP_008662351.1 | thaumatin-like protein [Zea mays] | 1.74E-40 |
| P31110 | Thaumatin-like protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0628600 PE=1 SV=1 | 2.54E-37 | |
| TrEMBL | A0A8T0TMY7 | Thaumatin-like protein OS=Panicum virgatum OX=38727 GN=PVAP13_4KG229333 PE=4 SV=1 | 4.28E-40 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology