Basic Information
Locus ID:
BH05.4247
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Thaumatin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH05 | 48618915 | 48619445 | + | BH05.4247 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.33 | 17,932.70 Da | 32.05 | 59.49 | 0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09217 | TLP-P | 28 | 175 | 3.26076E-70 | - |
| Pfam | PF00314 | Thaumatin family | 32 | 148 | 9.0E-34 | IPR001938 |
| SUPERFAMILY | SSF49870 | Osmotin, thaumatin-like protein | 25 | 175 | 9.29E-54 | IPR037176 |
| Gene3D | G3DSA:2.60.110.10 | Thaumatin | 26 | 176 | 1.3E-50 | IPR037176 |
| SMART | SM00205 | tha2 | 28 | 176 | 9.6E-35 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 1 | 153 | 2.3E-45 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 146 | 176 | 0.0053 | IPR001938 |
| ProSiteProfiles | PS51367 | Thaumatin family profile. | 25 | 176 | 33.736206 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 80 | 109 | 2.4E-42 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 27 | 39 | 2.4E-42 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 68 | 79 | 2.4E-42 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 166 | 175 | 2.4E-42 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 47 | 56 | 2.4E-42 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 117 | 133 | 2.4E-42 | IPR001938 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11650.1 | osmotin 34. osmotin-like protein | 2.85E-38 |
| RefSeq | XP_039802982.1 | thaumatin-like pathogenesis-related protein 3 [Panicum virgatum] | 1.58E-98 |
| P31110 | Thaumatin-like protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0628600 PE=1 SV=1 | 8.47E-80 | |
| TrEMBL | A0A1E5WG20 | Thaumatin-like protein OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0002686 PE=4 SV=1 | 3.03E-104 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology