Basic Information
Locus ID:
BH05.4245
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Thaumatin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| BH05 | 48607313 | 48607843 | - | BH05.4245 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.52 | 17,888.56 Da | 27.58 | 61.65 | 0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09217 | TLP-P | 28 | 175 | 1.4876E-71 | - |
| Pfam | PF00314 | Thaumatin family | 32 | 148 | 1.1E-33 | IPR001938 |
| SUPERFAMILY | SSF49870 | Osmotin, thaumatin-like protein | 25 | 175 | 5.62E-55 | IPR037176 |
| Gene3D | G3DSA:2.60.110.10 | Thaumatin | 26 | 146 | 1.8E-45 | IPR037176 |
| Gene3D | G3DSA:2.60.110.10 | Thaumatin | 147 | 176 | 1.2E-6 | IPR037176 |
| SMART | SM00205 | tha2 | 28 | 176 | 9.4E-40 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 145 | 176 | 1.6E-4 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 1 | 149 | 3.0E-46 | IPR001938 |
| ProSiteProfiles | PS51367 | Thaumatin family profile. | 25 | 176 | 35.528076 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 117 | 133 | 3.8E-43 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 68 | 79 | 3.8E-43 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 47 | 56 | 3.8E-43 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 166 | 175 | 3.8E-43 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 80 | 109 | 3.8E-43 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 27 | 39 | 3.8E-43 | IPR001938 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11650.1 | osmotin 34. osmotin-like protein | 2.51E-36 |
| RefSeq | XP_004963269.1 | thaumatin-like pathogenesis-related protein 1 [Setaria italica] | 3.27E-104 |
| P31110 | Thaumatin-like protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0628600 PE=1 SV=1 | 3.27E-77 | |
| TrEMBL | A0A1E5WG20 | Thaumatin-like protein OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0002686 PE=4 SV=1 | 3.16E-106 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology